STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nol10Nucleolar protein 10. (722 aa)    
Predicted Functional Partners:
ngdn
Neuroguidin; May inhibit mRNA translation; Belongs to the SAS10 family.
   
 
 0.998
nat10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
aatf
Apoptosis-antagonizing transcription factor.
   
 
 0.996
bysl
Bystin-like.
   
 
 0.993
wdr36
WD repeat domain 36.
   
 
 0.993
bms1
BMS1 ribosome biogenesis factor.
   
 
 0.992
esf1
ESF1, nucleolar pre-rRNA-processing protein, homolog (S. cerevisiae).
   
 
 0.992
wdr46
WD repeat domain 46.
   
 
 0.988
nol6
Nucleolar protein 6.
   
 
 0.987
UTP14C
Si:dkey-251i10.3.
   
 
 0.987
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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