STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmbr1lLimb region 1 homolog-like protein; May play a role in lymphocyte development by negatively regulating the canonical Wnt signaling pathway (By similarity). May act as a LCN1 receptor (By similarity). (491 aa)    
Predicted Functional Partners:
arf3a
ADP-ribosylation factor 3a; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.951
dnajc22
DnaJ (Hsp40) homolog, subfamily C, member 22.
   
 
 0.870
ikzf4
IKAROS family zinc finger 4.
      
 0.854
dusp28
Dual-specificity phosphatase 28.
      
 0.821
kmt2cb
Lysine (K)-specific methyltransferase 2Cb.
    
 
 0.810
B8JLK9_DANRE
Si:dkey-69o16.5.
      
 0.804
kmt2ca
Lysine (K)-specific methyltransferase 2Ca.
   
 
 0.762
zc3h15
Zinc finger CCCH domain-containing protein 15; Protects drg1 from proteolytic degradation.
      
 0.752
kmt2bb
Lysine (K)-specific methyltransferase 2Bb.
      
 0.745
proca-2
Protein C (inactivator of coagulation factors Va and VIIIa), a.
    
 
 0.744
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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