fam120a protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
camsap1a	clns1a	ENSDARP00000093418	ENSDARP00000133397	Calmodulin-regulated spectrin-associated protein 1a.	Chloride channel, nucleotide-sensitive, 1A.	0.473
camsap1a	fam120a	ENSDARP00000093418	ENSDARP00000019713	Calmodulin-regulated spectrin-associated protein 1a.	Family with sequence similarity 120A.	0.723
camsap1a	manba	ENSDARP00000093418	ENSDARP00000149274	Calmodulin-regulated spectrin-associated protein 1a.	Mannosidase, beta A, lysosomal.	0.443
camsap1a	nup54	ENSDARP00000093418	ENSDARP00000130940	Calmodulin-regulated spectrin-associated protein 1a.	Nucleoporin 54.	0.482
camsap1a	zbtb46	ENSDARP00000093418	ENSDARP00000117285	Calmodulin-regulated spectrin-associated protein 1a.	Zinc finger and BTB domain-containing 46.	0.412
clns1a	camsap1a	ENSDARP00000133397	ENSDARP00000093418	Chloride channel, nucleotide-sensitive, 1A.	Calmodulin-regulated spectrin-associated protein 1a.	0.473
clns1a	fam120a	ENSDARP00000133397	ENSDARP00000019713	Chloride channel, nucleotide-sensitive, 1A.	Family with sequence similarity 120A.	0.691
clns1a	manba	ENSDARP00000133397	ENSDARP00000149274	Chloride channel, nucleotide-sensitive, 1A.	Mannosidase, beta A, lysosomal.	0.488
clns1a	nup54	ENSDARP00000133397	ENSDARP00000130940	Chloride channel, nucleotide-sensitive, 1A.	Nucleoporin 54.	0.540
eral1	fam120a	ENSDARP00000078213	ENSDARP00000019713	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	Family with sequence similarity 120A.	0.605
eral1	fastkd2	ENSDARP00000078213	ENSDARP00000100864	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	FAST kinase domains 2.	0.712
fam120a	camsap1a	ENSDARP00000019713	ENSDARP00000093418	Family with sequence similarity 120A.	Calmodulin-regulated spectrin-associated protein 1a.	0.723
fam120a	clns1a	ENSDARP00000019713	ENSDARP00000133397	Family with sequence similarity 120A.	Chloride channel, nucleotide-sensitive, 1A.	0.691
fam120a	eral1	ENSDARP00000019713	ENSDARP00000078213	Family with sequence similarity 120A.	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.605
fam120a	fastkd2	ENSDARP00000019713	ENSDARP00000100864	Family with sequence similarity 120A.	FAST kinase domains 2.	0.607
fam120a	manba	ENSDARP00000019713	ENSDARP00000149274	Family with sequence similarity 120A.	Mannosidase, beta A, lysosomal.	0.695
fam120a	nup54	ENSDARP00000019713	ENSDARP00000130940	Family with sequence similarity 120A.	Nucleoporin 54.	0.729
fam120a	pum2	ENSDARP00000019713	ENSDARP00000081013	Family with sequence similarity 120A.	Pumilio RNA-binding family member 2.	0.626
fam120a	rbm22	ENSDARP00000019713	ENSDARP00000004055	Family with sequence similarity 120A.	Pre-mRNA-splicing factor RBM22; Required for pre-mRNA splicing as component of the activated spliceosome. Involved in the first step of pre-mRNA splicing. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre-mRNA intron near the 5' splice site during the activation and catalytic phases of the spliceosome cycle (By similarity). Required for normal early embryogenesis.	0.718
fam120a	upf1	ENSDARP00000019713	ENSDARP00000153550	Family with sequence similarity 120A.	UPF1 RNA helicase and ATPase.	0.681

page 1 of 2

Server load: low (18%) [HD]

Share

Network

Co-occurrence

Experiments

Co-expression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About