Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
c1ql3aComplement component 1, q subcomponent-like 3a. (267 aa)    
Predicted Functional Partners:
adgrb3
Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.781
cfhl1
Complement factor H-like 1.
      
 0.681
fam135a
Family with sequence similarity 135 member A.
      
 0.666
mdga1
MAM domain-containing glycosylphosphatidylinositol anchor 1.
     
 0.665
glyr1
Putative oxidoreductase GLYR1; May have oxidoreductase activity. Regulates p38 MAP kinase activity by mediating stress activation of mapk14 and specifically regulating mapk14 signaling; Belongs to the HIBADH-related family. NP60 subfamily.
      
 0.596
nbeal1
Neurobeachin-like 1.
    
 
 0.570
F1QCK0_DANRE
Phospholipase B-like; Putative phospholipase.
      
 0.512
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
      
 0.490
cntn3a.1
Contactin 3a, tandem duplicate 1.
      
 0.469
ENSDARP00000131359
Uncharacterized protein.
      
 0.469
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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