Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c1d | exosc1 | ENSDARP00000020042 | ENSDARP00000078068 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 1. | 0.999 |
c1d | exosc10 | ENSDARP00000020042 | ENSDARP00000122676 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 10. | 0.999 |
c1d | exosc2 | ENSDARP00000020042 | ENSDARP00000124376 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 2. | 0.998 |
c1d | exosc4 | ENSDARP00000020042 | ENSDARP00000138743 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 4. | 0.990 |
c1d | exosc5 | ENSDARP00000020042 | ENSDARP00000059351 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 5. | 0.998 |
c1d | exosc7 | ENSDARP00000020042 | ENSDARP00000139168 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 7. | 0.987 |
c1d | exosc8 | ENSDARP00000020042 | ENSDARP00000090326 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome component 8. | 0.998 |
c1d | exosc9 | ENSDARP00000020042 | ENSDARP00000005262 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.999 |
c1d | mphosph6 | ENSDARP00000020042 | ENSDARP00000066986 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | M-phase phosphoprotein 6. | 0.977 |
c1d | mtrex | ENSDARP00000020042 | ENSDARP00000024380 | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | Mtr4 exosome RNA helicase. | 0.982 |
exosc1 | c1d | ENSDARP00000078068 | ENSDARP00000020042 | Exosome component 1. | Nuclear nucleic acid-binding protein C1D; Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA. | 0.999 |
exosc1 | exosc10 | ENSDARP00000078068 | ENSDARP00000122676 | Exosome component 1. | Exosome component 10. | 0.999 |
exosc1 | exosc2 | ENSDARP00000078068 | ENSDARP00000124376 | Exosome component 1. | Exosome component 2. | 0.999 |
exosc1 | exosc4 | ENSDARP00000078068 | ENSDARP00000138743 | Exosome component 1. | Exosome component 4. | 0.999 |
exosc1 | exosc5 | ENSDARP00000078068 | ENSDARP00000059351 | Exosome component 1. | Exosome component 5. | 0.999 |
exosc1 | exosc7 | ENSDARP00000078068 | ENSDARP00000139168 | Exosome component 1. | Exosome component 7. | 0.999 |
exosc1 | exosc8 | ENSDARP00000078068 | ENSDARP00000090326 | Exosome component 1. | Exosome component 8. | 0.999 |
exosc1 | exosc9 | ENSDARP00000078068 | ENSDARP00000005262 | Exosome component 1. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.999 |
exosc1 | mphosph6 | ENSDARP00000078068 | ENSDARP00000066986 | Exosome component 1. | M-phase phosphoprotein 6. | 0.974 |
exosc1 | mtrex | ENSDARP00000078068 | ENSDARP00000024380 | Exosome component 1. | Mtr4 exosome RNA helicase. | 0.984 |
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