STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxg1bForkhead box G1b. (341 aa)    
Predicted Functional Partners:
ppm1h
Protein phosphatase 1H.
      
 0.719
nrip1a
Nuclear receptor-interacting protein 1a.
      
 0.669
hmx4
H6 family homeobox 4.
   
 
 0.605
guca1c
Guanylate cyclase-activating protein 3.
   
 
 0.584
hmx1
H6 family homeobox 1.
    
 
 0.580
hinfp
Histone H4 transcription factor.
      
 0.560
otx5
Orthodenticle homolog 5.
   
  
 0.560
hoxc1a
Homeobox protein Hox-C1a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
    
 
 0.560
nr6a1b
Nuclear receptor subfamily 6 group A member 1-B; Probable orphan nuclear receptor. Binds to a response element containing repeats of the motif 5'-AGGTCA-3' (By similarity).
    
 
 0.554
adgrb2
Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.
      
 0.550
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.