STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf76Zinc finger protein 76. (516 aa)    
Predicted Functional Partners:
zmat5
Zinc finger matrin-type protein 5.
   
  
 0.900
atp5mf
ATP synthase membrane subunit f.
      
 0.743
syt11b
Synaptotagmin XIb.
      
 0.647
aimp2
Aminoacyl tRNA synthetase complex-interacting multifunctional protein 2.
      
 0.619
rnf152
E3 ubiquitin-protein ligase rnf152; E3 ubiquitin-protein ligase mediating 'Lys-63'-linked polyubiquitination of RRAGA in response to amino acid starvation. Thereby, regulates mTORC1 signaling and plays a role in the cellular response to amino acid availability. Also mediates 'Lys-48'-linked polyubiquitination of target proteins and their subsequent targeting to the proteasome for degradation; Belongs to the RNF152 family.
   
 
 0.577
syt11a
Synaptotagmin XIa.
      
 0.540
tbc1d9
TBC1 domain family, member 9 (with GRAM domain).
      
 0.540
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.540
mapk6
Extracellular signal-regulated kinase 3.
    
 
 0.490
nup153
Nucleoporin 153.
    
 
 0.487
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.