Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc35a3aSolute carrier family 35 member A3a. (328 aa)    
Predicted Functional Partners:
hfm1
Helicase for meiosis 1.
 
      0.800
hiat1b
Hippocampus abundant transcript 1b.
 
 
  
 0.653
hiat1a
Hippocampus abundant transcript 1a.
 
 
  
 0.620
LOC557306
MFS domain-containing protein.
 
 
  
 0.611
ENSDARP00000155533
Si:ch211-87m7.2.
 
 
  
 0.598
tmem165
GDT1 family protein.
   
  
 0.452
mfsd10
Major facilitator superfamily domain-containing 10.
      
 0.432
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.429
ddrgk1
DDRGK domain-containing protein 1; By regulating the post-translational modification of specific proteins, may play a role in different cellular process (By similarity). Plays a role in cartilage development through SOX9, inhibiting the ubiquitin-mediated proteasomal degradation of this transcriptional regulator.
      
 0.425
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.417
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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