STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam53bProtein FAM53B; Acts as a regulator of Wnt signaling pathway by regulating beta-catenin (ctnnb1) nuclear localization. Required for appendage regeneration by regulating cell proliferation. (379 aa)    
Predicted Functional Partners:
ccl34b.4
Chemokine (C-C motif) ligand 34b, duplicate 4.
      
 0.835
F6PDU0_DANRE
Si:ch211-171h4.5.
      
 0.807
X1WBK1_DANRE
Si:ch73-380l3.4.
      
 0.807
MSMP
Si:ch211-69e13.6.
      
 0.730
xkrx
XK-related protein.
   
  
 0.693
ankrd54
Ankyrin repeat domain-containing protein 54; Plays an important role in regulating intracellular signaling events associated with erythroid terminal differentiation.
   
  
 0.612
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.600
trarg1a
Trafficking regulator of GLUT4 (SLC2A4) 1a.
      
 0.568
rap2c
RAP2C, member of RAS oncogene family.
      
 0.555
LOC100147849
Mucin 5.3.
      
 0.555
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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