sfpq protein (Danio rerio) - STRING interaction network

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[Homology]

Score

sfpq

Splicing factor proline/glutamine-rich. (638 aa)

Predicted Functional Partners:

hnrnpm

0.763

fus

0.758

u2af2b

0.728

nudt21

0.701

tardbp

0.661

hnrnpub

0.661

cdc5l

0.656

snrnp70

0.654

cpsf6

0.641

hnrnpl2

0.641

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cdc5l	hnrnpm	ENSDARP00000064312	ENSDARP00000121443	CDC5 cell division cycle 5-like (S. pombe).	Heterogeneous nuclear ribonucleoprotein M.	0.902
cdc5l	sfpq	ENSDARP00000064312	ENSDARP00000020522	CDC5 cell division cycle 5-like (S. pombe).	Splicing factor proline/glutamine-rich.	0.656
cdc5l	snrnp70	ENSDARP00000064312	ENSDARP00000055278	CDC5 cell division cycle 5-like (S. pombe).	Small nuclear ribonucleoprotein 70 (U1).	0.426
cdc5l	u2af2b	ENSDARP00000064312	ENSDARP00000023679	CDC5 cell division cycle 5-like (S. pombe).	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.848
cpsf6	hnrnpm	ENSDARP00000076726	ENSDARP00000121443	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Heterogeneous nuclear ribonucleoprotein M.	0.638
cpsf6	hnrnpub	ENSDARP00000076726	ENSDARP00000112099	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Heterogeneous nuclear ribonucleoprotein Ub.	0.400
cpsf6	nudt21	ENSDARP00000076726	ENSDARP00000017229	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.999
cpsf6	sfpq	ENSDARP00000076726	ENSDARP00000020522	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Splicing factor proline/glutamine-rich.	0.641
cpsf6	snrnp70	ENSDARP00000076726	ENSDARP00000055278	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Small nuclear ribonucleoprotein 70 (U1).	0.410
cpsf6	u2af2b	ENSDARP00000076726	ENSDARP00000023679	Cleavage and polyadenylation specificity factor subunit 6; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.865
fus	hnrnpl2	ENSDARP00000055339	ENSDARP00000115723	FUS RNA-binding protein.	Heterogeneous nuclear ribonucleoprotein L2.	0.552
fus	hnrnpm	ENSDARP00000055339	ENSDARP00000121443	FUS RNA-binding protein.	Heterogeneous nuclear ribonucleoprotein M.	0.749
fus	hnrnpub	ENSDARP00000055339	ENSDARP00000112099	FUS RNA-binding protein.	Heterogeneous nuclear ribonucleoprotein Ub.	0.553
fus	sfpq	ENSDARP00000055339	ENSDARP00000020522	FUS RNA-binding protein.	Splicing factor proline/glutamine-rich.	0.758
fus	snrnp70	ENSDARP00000055339	ENSDARP00000055278	FUS RNA-binding protein.	Small nuclear ribonucleoprotein 70 (U1).	0.659
fus	tardbp	ENSDARP00000055339	ENSDARP00000058554	FUS RNA-binding protein.	TAR DNA-binding protein.	0.996
hnrnpl2	fus	ENSDARP00000115723	ENSDARP00000055339	Heterogeneous nuclear ribonucleoprotein L2.	FUS RNA-binding protein.	0.552
hnrnpl2	hnrnpm	ENSDARP00000115723	ENSDARP00000121443	Heterogeneous nuclear ribonucleoprotein L2.	Heterogeneous nuclear ribonucleoprotein M.	0.605
hnrnpl2	hnrnpub	ENSDARP00000115723	ENSDARP00000112099	Heterogeneous nuclear ribonucleoprotein L2.	Heterogeneous nuclear ribonucleoprotein Ub.	0.800
hnrnpl2	sfpq	ENSDARP00000115723	ENSDARP00000020522	Heterogeneous nuclear ribonucleoprotein L2.	Splicing factor proline/glutamine-rich.	0.641

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