Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fundc1 | tbc1d17 | ENSDARP00000059836 | ENSDARP00000020784 | FUN14 domain-containing protein 1; Acts as an activator of hypoxia-induced mitophagy, an important mechanism for mitochondrial quality control; Belongs to the FUN14 family. | TBC1 domain family, member 17. | 0.572 |
| fuz | med25 | ENSDARP00000103777 | ENSDARP00000055392 | Fuzzy planar cell polarity protein. | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.806 |
| fuz | prrg2 | ENSDARP00000103777 | ENSDARP00000128687 | Fuzzy planar cell polarity protein. | Proline-rich Gla (G-carboxyglutamic acid) 2. | 0.744 |
| fuz | scaf1 | ENSDARP00000103777 | ENSDARP00000126216 | Fuzzy planar cell polarity protein. | SR-related CTD-associated factor 1. | 0.742 |
| fuz | tbc1d17 | ENSDARP00000103777 | ENSDARP00000020784 | Fuzzy planar cell polarity protein. | TBC1 domain family, member 17. | 0.565 |
| gdi2 | rab8a | ENSDARP00000009258 | ENSDARP00000125104 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RAB8A, member RAS oncogene family. | 0.873 |
| gdi2 | tbc1d17 | ENSDARP00000009258 | ENSDARP00000020784 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | TBC1 domain family, member 17. | 0.579 |
| med25 | fuz | ENSDARP00000055392 | ENSDARP00000103777 | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | Fuzzy planar cell polarity protein. | 0.806 |
| med25 | prrg2 | ENSDARP00000055392 | ENSDARP00000128687 | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | Proline-rich Gla (G-carboxyglutamic acid) 2. | 0.852 |
| med25 | scaf1 | ENSDARP00000055392 | ENSDARP00000126216 | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | SR-related CTD-associated factor 1. | 0.845 |
| med25 | tbc1d17 | ENSDARP00000055392 | ENSDARP00000020784 | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | TBC1 domain family, member 17. | 0.706 |
| prrg2 | fuz | ENSDARP00000128687 | ENSDARP00000103777 | Proline-rich Gla (G-carboxyglutamic acid) 2. | Fuzzy planar cell polarity protein. | 0.744 |
| prrg2 | med25 | ENSDARP00000128687 | ENSDARP00000055392 | Proline-rich Gla (G-carboxyglutamic acid) 2. | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.852 |
| prrg2 | scaf1 | ENSDARP00000128687 | ENSDARP00000126216 | Proline-rich Gla (G-carboxyglutamic acid) 2. | SR-related CTD-associated factor 1. | 0.807 |
| prrg2 | tbc1d17 | ENSDARP00000128687 | ENSDARP00000020784 | Proline-rich Gla (G-carboxyglutamic acid) 2. | TBC1 domain family, member 17. | 0.645 |
| rab8a | gdi2 | ENSDARP00000125104 | ENSDARP00000009258 | RAB8A, member RAS oncogene family. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.873 |
| rab8a | tbc1d17 | ENSDARP00000125104 | ENSDARP00000020784 | RAB8A, member RAS oncogene family. | TBC1 domain family, member 17. | 0.668 |
| scaf1 | fuz | ENSDARP00000126216 | ENSDARP00000103777 | SR-related CTD-associated factor 1. | Fuzzy planar cell polarity protein. | 0.742 |
| scaf1 | med25 | ENSDARP00000126216 | ENSDARP00000055392 | SR-related CTD-associated factor 1. | Mediator of RNA polymerase II transcription subunit 25; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.845 |
| scaf1 | prrg2 | ENSDARP00000126216 | ENSDARP00000128687 | SR-related CTD-associated factor 1. | Proline-rich Gla (G-carboxyglutamic acid) 2. | 0.807 |
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