Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slco3a1Solute carrier organic anion transporter family member. (701 aa)    
Predicted Functional Partners:
mctp2b
Multiple C2 domains, transmembrane 2b.
      
 0.784
oxt
Oxytocin; Belongs to the vasopressin/oxytocin family.
     
  0.750
avp
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
     
  0.750
slco5a1a
Solute carrier organic anion transporter family member 5A1a.
      
 0.740
kcnh5b
Potassium voltage-gated channel, subfamily H (eag-related), member 5b.
      
 0.720
slc13a5b
Solute carrier family 13 member 5b.
      
 0.686
jagn1a
Protein jagunal homolog 1-A; Endoplasmic reticulum transmembrane protein involved in vesicle-mediated transport, which is required for neutrophil function. Belongs to the jagunal family.
   
  
 0.672
ap1s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.668
tmem117
Transmembrane protein 117; May be involved in endoplasmic reticulum (ER) stress-induced cell death pathway; Belongs to the TMEM117 family.
      
 0.661
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.636
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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