Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dcbld1Discoidin, CUB and LCCL domain-containing 1. (703 aa)    
Predicted Functional Partners:
kpna3
Importin subunit alpha; Belongs to the importin alpha family.
      
 0.683
pgls
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
      
 0.665
kpna6
Importin subunit alpha; Belongs to the importin alpha family.
      
 0.662
lmbrd1
Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily.
      
 0.611
crkl
V-crk sarcoma virus CT10 oncogene homolog (Avian)-like.
    
 
 0.608
crk
V-crk sarcoma virus CT10 oncogene homolog (Avian).
    
 
 0.602
kpna7
Importin subunit alpha; Belongs to the importin alpha family.
      
 0.594
vgll2b
Vestigial-like family member 2b.
      
 0.594
vgll2a
Vestigial-like family member 2a.
 
    
 0.594
cdhr2
Uncharacterized protein.
      
 0.594
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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