Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ccna1 | cdc20 | ENSDARP00000020968 | ENSDARP00000140575 | Cyclin A1; Belongs to the cyclin family. | Cell division cycle 20 homolog. | 0.977 |
ccna1 | cdc6 | ENSDARP00000020968 | ENSDARP00000008736 | Cyclin A1; Belongs to the cyclin family. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.997 |
ccna1 | cdk1 | ENSDARP00000020968 | ENSDARP00000109027 | Cyclin A1; Belongs to the cyclin family. | Cell division control protein 2; Belongs to the protein kinase superfamily. | 0.999 |
ccna1 | cdk2 | ENSDARP00000020968 | ENSDARP00000032448 | Cyclin A1; Belongs to the cyclin family. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.999 |
ccna1 | cdkn1a | ENSDARP00000020968 | ENSDARP00000114199 | Cyclin A1; Belongs to the cyclin family. | Cyclin-dependent kinase inhibitor 1A. | 0.976 |
ccna1 | cdkn1bb | ENSDARP00000020968 | ENSDARP00000070891 | Cyclin A1; Belongs to the cyclin family. | Cyclin-dependent kinase inhibitor 1b (P27, kip1). | 0.968 |
ccna1 | cdkn1ca | ENSDARP00000020968 | ENSDARP00000009882 | Cyclin A1; Belongs to the cyclin family. | Cyclin-dependent kinase inhibitor 1C (P57, Kip2). | 0.972 |
ccna1 | e2f1 | ENSDARP00000020968 | ENSDARP00000137549 | Cyclin A1; Belongs to the cyclin family. | E2F transcription factor 1. | 0.987 |
ccna1 | rb1 | ENSDARP00000020968 | ENSDARP00000021737 | Cyclin A1; Belongs to the cyclin family. | Retinoblastoma 1. | 0.967 |
ccna1 | skp2 | ENSDARP00000020968 | ENSDARP00000092527 | Cyclin A1; Belongs to the cyclin family. | S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. | 0.978 |
cdc20 | ccna1 | ENSDARP00000140575 | ENSDARP00000020968 | Cell division cycle 20 homolog. | Cyclin A1; Belongs to the cyclin family. | 0.977 |
cdc20 | cdc6 | ENSDARP00000140575 | ENSDARP00000008736 | Cell division cycle 20 homolog. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.878 |
cdc20 | cdk1 | ENSDARP00000140575 | ENSDARP00000109027 | Cell division cycle 20 homolog. | Cell division control protein 2; Belongs to the protein kinase superfamily. | 0.973 |
cdc20 | cdk2 | ENSDARP00000140575 | ENSDARP00000032448 | Cell division cycle 20 homolog. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.961 |
cdc20 | cdkn1a | ENSDARP00000140575 | ENSDARP00000114199 | Cell division cycle 20 homolog. | Cyclin-dependent kinase inhibitor 1A. | 0.412 |
cdc20 | cdkn1ca | ENSDARP00000140575 | ENSDARP00000009882 | Cell division cycle 20 homolog. | Cyclin-dependent kinase inhibitor 1C (P57, Kip2). | 0.417 |
cdc20 | e2f1 | ENSDARP00000140575 | ENSDARP00000137549 | Cell division cycle 20 homolog. | E2F transcription factor 1. | 0.571 |
cdc20 | skp2 | ENSDARP00000140575 | ENSDARP00000092527 | Cell division cycle 20 homolog. | S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. | 0.939 |
cdc6 | ccna1 | ENSDARP00000008736 | ENSDARP00000020968 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Cyclin A1; Belongs to the cyclin family. | 0.997 |
cdc6 | cdc20 | ENSDARP00000008736 | ENSDARP00000140575 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Cell division cycle 20 homolog. | 0.878 |
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