Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aif1lAllograft inflammatory factor 1-like. (148 aa)    
Predicted Functional Partners:
ENSDARP00000136326
Si:zfos-1069f5.1.
   
  
 0.669
srsf10b
Serine and arginine-rich-splicing factor 10b.
    
 0.613
eea1
Early endosome antigen 1.
    
   0.561
ccl35.2
Chemokine (C-C motif) ligand 35, duplicate 2.
      
 0.560
ppp3r1b
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
    
 0.551
ppp3r1a
Protein phosphatase 3, regulatory subunit B, alpha a.
    
 0.551
naa10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
      
 0.543
wdr90
WD repeat domain 90.
    
 
 0.539
adka
Adenosine kinase a.
   
   0.536
adkb
Adenosine kinase b.
   
   0.536
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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