STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aif1lAllograft inflammatory factor 1-like. (148 aa)    
Predicted Functional Partners:
ENSDARP00000136326
Si:zfos-1069f5.1.
      
 0.720
wipf1a
WAS/WASL-interacting protein family, member 1a.
    
 
 0.652
xcr1a.1
Chemokine (C motif) receptor 1a, duplicate 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.582
il12rb2l
Interleukin 12 receptor, beta 2a,-like.
    
 
 0.569
tmem119a
Transmembrane protein 119a.
   
  
 0.567
wdr90
WD repeat domain 90.
    
 
 0.541
csf1rb
Colony-stimulating factor 1 receptor, b; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.540
pstpip2
Proline-serine-threonine phosphatase-interacting protein 2.
    
 
 0.531
tlr5a
Toll-like receptor 5a; Belongs to the Toll-like receptor family.
   
 
 0.493
caska
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 
 0.492
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.