STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mid1ip1bMid1-interacting protein 1-B; Involved in stabilization of microtubules. May play a role in the regulation of lipogenesis (By similarity); Belongs to the SPOT14 family. (147 aa)    
Predicted Functional Partners:
nxph2b
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.837
nxph2a
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.806
abhd2b
Monoacylglycerol lipase ABHD2; Progesterone-dependent acylglycerol lipase that catalyzes hydrolysis of endocannabinoid arachidonoylglycerol (AG) from cell membrane. Acts as a progesterone receptor: progesterone-binding activates the acylglycerol lipase activity, mediating degradation of 1- arachidonoylglycerol (1AG) and 2-arachidonoylglycerol (2AG) to glycerol and arachidonic acid (AA). Also displays an ester hydrolase activity against acetyl ester, butanoate ester and hexadecanoate ester. Plays a key role in sperm capacitation in response to progesterone by mediating degradation of 2A [...]
   
  
 0.743
lyrm5b
LYR motif-containing protein 5B; Belongs to the complex I LYR family.
      
 0.743
mid1ip1l
Mid1-interacting protein 1-like; Involved in stabilization of microtubules. May play a role in the regulation of lipogenesis (By similarity); Belongs to the SPOT14 family.
  
 
 
0.713
mid1ip1a
Mid1-interacting protein 1A; Involved in stabilization of microtubules. May play a role in the regulation of lipogenesis (By similarity); Belongs to the SPOT14 family.
  
  
 
0.707
cd74a
CD74 molecule, major histocompatibility complex, class II invariant chain a.
      
 0.533
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+-dependent) 1-like.
   
  
 0.485
nt5c2l1
5'-nucleotidase, cytosolic II,-like 1.
      
 0.483
abcb11a
ATP-binding cassette, sub-family B (MDR/TAP), member 11a.
      
 0.480
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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