Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phf20l1PHD finger protein 20-like 1. (1116 aa)    
Predicted Functional Partners:
kansl3
KAT8 regulatory NSL complex subunit 3; As part of the NSL complex it is involved in acetylation of nucleosomal histone H4 on several lysine residues and therefore may be involved in the regulation of transcription.
    
 0.996
mcrs1
Microspherule protein 1.
    
 0.987
kansl1b
KAT8 regulatory NSL complex subunit 1b.
   
 0.980
kansl1l
KAT8 regulatory NSL complex subunit 1-like.
   
 0.980
phf20a
PHD finger protein 20, a.
   
 
0.918
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 
 0.914
kansl1a
KAT8 regulatory NSL complex subunit 1a.
   
 0.874
gatad2ab
GATA zinc finger domain-containing 2Ab.
   
 
 0.814
gatad2b
GATA zinc finger domain-containing 2B.
   
 
 0.814
lman2la
Lectin, mannose-binding 2-like a.
      
 0.814
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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