STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilf2Interleukin enhancer-binding factor 2 homolog; Appears to function predominantly as a heterodimeric complex with ILF3. This complex may function to regulate transcription of undefined genes (By similarity) (387 aa)    
Predicted Functional Partners:
ilf3b
Interleukin enhancer-binding factor 3 homolog; RNA-binding protein that plays an essential role in the biogenesis of circular RNAs (circRNAs) which are produced by back- splicing circularization of pre-mRNAs. Within the nucleus, promotes circRNAs processing by stabilizing the regulatory elements residing in the flanking introns of the circularized exons. Plays thereby a role in the back-splicing of a subset of circRNAs. As a consequence, participates in a wide range of transcriptional and post-transcriptional processes. Upon viral infection, ILF3 accumulates in the cytoplasm and partic [...]
   
 
0.972
hnrnpr
Heterogeneous nuclear ribonucleoprotein R
   
 
 0.951
ddx39b
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
   
 
 0.934
alyref
Aly/REF export factor
   
    0.933
erh
Enhancer of rudimentary homolog; May have a role in the cell cycle
   
    0.932
hnrnpl2
Heterogeneous nuclear ribonucleoprotein L2
   
 
 0.930
cda
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family
   
 
 0.920
hnrnpm
Heterogeneous nuclear ribonucleoprotein M
   
 
 0.916
timp2a
Tissue inhibitor of metalloproteinase 2a
     
 0.913
ddx39aa
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
   
 
 0.912
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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