STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bzw1aBasic leucine zipper and W2 domain-containing protein 1-A; Enhances histone H4 gene transcription but does not seem to bind DNA directly. (419 aa)    
Predicted Functional Partners:
crygm2d4
Crystallin gamma embryonic M2 type 3; Belongs to the beta/gamma-crystallin family.
      
 0.950
crygm2d3
Crystallin, gamma M2d3.
      
 0.950
nif3l1
NIF3-like protein 1; May function as a transcriptional corepressor through its interaction with COPS2, negatively regulating the expression of genes involved in neuronal differentiation.
      
 0.860
ppil3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  
 0.858
cryba1b
Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.
      
 0.833
rpl7a
Ribosomal protein L7a.
   
 
 0.796
ubp1
Upstream-binding protein 1.
      
 0.756
ndufb3
NADH:ubiquinone oxidoreductase subunit B3.
      
 0.731
cryba2b
Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.
      
 0.698
rpl21
Ribosomal protein L21.
   
  
 0.673
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.