STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpp5bMembrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (639 aa)    
Predicted Functional Partners:
crb2b
Crumbs cell polarity complex component 2b.
    
 
 0.952
crb2a
Crumbs cell polarity complex component 2a.
    
 
 0.925
lin7c
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 
 0.829
crb3a
Crumbs-like protein 3a.
    
 
 0.682
crb1
Crumbs cell polarity complex component 1.
    
 
 0.666
mybl2b
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
      
 0.647
patj
PATJ crumbs cell polarity complex component.
    
 
 0.640
amotl1
Angiomotin_C domain-containing protein.
    
 
 0.577
amot
Angiomotin.
    
 
 0.577
ENSDARP00000131526
Si:dkey-92j12.5.
    
 
 0.571
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.