Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mpp5bMembrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (639 aa)    
Predicted Functional Partners:
crb2b
Crumbs cell polarity complex component 2b.
    
 0.958
crb3a
Crumbs-like protein 3a.
    
 0.947
amotl1
Angiomotin_C domain-containing protein.
    
 0.934
amot
Angiomotin.
    
 0.934
pard6a
Par-6 family cell polarity regulator alpha.
   
 0.933
patj
PATJ crumbs cell polarity complex component.
   
 0.931
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
   
 0.929
ENSDARP00000131526
Si:dkey-92j12.5.
   
 0.918
crb2a
Crumbs cell polarity complex component 2a.
    
 0.888
crb3b
Crumbs-like protein 3b.
     
 0.875
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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