Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bmp4 | foxf1 | ENSDARP00000069635 | ENSDARP00000022888 | Bone morphogenetic protein 4. | Forkhead box protein F1. | 0.609 |
bmp4 | gata4 | ENSDARP00000069635 | ENSDARP00000135304 | Bone morphogenetic protein 4. | GATA-binding protein 4. | 0.835 |
bmp4 | gata6 | ENSDARP00000069635 | ENSDARP00000137653 | Bone morphogenetic protein 4. | GATA-binding protein 6. | 0.718 |
bmp4 | nkx2.5 | ENSDARP00000069635 | ENSDARP00000016308 | Bone morphogenetic protein 4. | NK2 homeobox 5. | 0.877 |
bmp4 | nkx3-2 | ENSDARP00000069635 | ENSDARP00000054821 | Bone morphogenetic protein 4. | Bagpipe homeobox transcription factor Bapx1. | 0.517 |
bmp4 | pitx2 | ENSDARP00000069635 | ENSDARP00000052568 | Bone morphogenetic protein 4. | Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. | 0.763 |
bmp4 | sox17 | ENSDARP00000069635 | ENSDARP00000135455 | Bone morphogenetic protein 4. | SRY-box transcription factor 17. | 0.751 |
bmp4 | tbxta | ENSDARP00000069635 | ENSDARP00000141934 | Bone morphogenetic protein 4. | T-box transcription factor T-A; Involved in the transcriptional regulation of genes required for mesoderm differentiation, including itself. Indispensable for the formation of the notochord and the tail structure. Functions together with tbx16/spadetail in development of trunk and tail mesoderm. Functions by itself early in development to repress medial floor plate and promote notochord fate but at later times, functions together with tbx16/spadetail to promote medial floor plate formation. Acts in a parallel pathway to, but cooperates with, non-canonical wnt-signaling during tail form [...] | 0.867 |
bmp4 | tbxtb | ENSDARP00000069635 | ENSDARP00000150638 | Bone morphogenetic protein 4. | T-box transcription factor Tb. | 0.863 |
foxf1 | bmp4 | ENSDARP00000022888 | ENSDARP00000069635 | Forkhead box protein F1. | Bone morphogenetic protein 4. | 0.609 |
foxf1 | gata4 | ENSDARP00000022888 | ENSDARP00000135304 | Forkhead box protein F1. | GATA-binding protein 4. | 0.522 |
foxf1 | gata6 | ENSDARP00000022888 | ENSDARP00000137653 | Forkhead box protein F1. | GATA-binding protein 6. | 0.585 |
foxf1 | khdrbs1b | ENSDARP00000022888 | ENSDARP00000094247 | Forkhead box protein F1. | KH domain-containing, RNA-binding, signal transduction-associated 1b. | 0.557 |
foxf1 | nkx2.5 | ENSDARP00000022888 | ENSDARP00000016308 | Forkhead box protein F1. | NK2 homeobox 5. | 0.670 |
foxf1 | nkx3-2 | ENSDARP00000022888 | ENSDARP00000054821 | Forkhead box protein F1. | Bagpipe homeobox transcription factor Bapx1. | 0.555 |
foxf1 | pitx2 | ENSDARP00000022888 | ENSDARP00000052568 | Forkhead box protein F1. | Pituitary homeobox 2; Isoform a and isoform c differentially regulate mesendoderm formation and asymmetric organ development. Both isoforms regulate left-right development, but isoform a has a stronger effect on heart laterality; Belongs to the paired homeobox family. Bicoid subfamily. | 0.597 |
foxf1 | sox17 | ENSDARP00000022888 | ENSDARP00000135455 | Forkhead box protein F1. | SRY-box transcription factor 17. | 0.577 |
foxf1 | tbxta | ENSDARP00000022888 | ENSDARP00000141934 | Forkhead box protein F1. | T-box transcription factor T-A; Involved in the transcriptional regulation of genes required for mesoderm differentiation, including itself. Indispensable for the formation of the notochord and the tail structure. Functions together with tbx16/spadetail in development of trunk and tail mesoderm. Functions by itself early in development to repress medial floor plate and promote notochord fate but at later times, functions together with tbx16/spadetail to promote medial floor plate formation. Acts in a parallel pathway to, but cooperates with, non-canonical wnt-signaling during tail form [...] | 0.507 |
foxf1 | tbxtb | ENSDARP00000022888 | ENSDARP00000150638 | Forkhead box protein F1. | T-box transcription factor Tb. | 0.531 |
gata4 | bmp4 | ENSDARP00000135304 | ENSDARP00000069635 | GATA-binding protein 4. | Bone morphogenetic protein 4. | 0.835 |
page 1 of 4