LOC795887 protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC795887

G domain-containing protein. (287 aa)

Predicted Functional Partners:

mov10b.1

0.845

ENSDARP00000135458

0.780

tpm4b

0.718

mxa

0.589

ubxn7

0.561

mrpl46

0.531

mrpl27

0.519

mrpl23

0.507

mrpl3

0.505

mrpl19

0.502

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSDARP00000135458	LOC795887	ENSDARP00000135458	ENSDARP00000022947	Si:dkey-40c23.2.	G domain-containing protein.	0.780
ENSDARP00000135458	mov10b.1	ENSDARP00000135458	ENSDARP00000081380	Si:dkey-40c23.2.	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	0.597
ENSDARP00000135458	tpm4b	ENSDARP00000135458	ENSDARP00000137812	Si:dkey-40c23.2.	Tropomyosin 4b.	0.414
LOC795887	ENSDARP00000135458	ENSDARP00000022947	ENSDARP00000135458	G domain-containing protein.	Si:dkey-40c23.2.	0.780
LOC795887	mov10b.1	ENSDARP00000022947	ENSDARP00000081380	G domain-containing protein.	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	0.845
LOC795887	mrpl19	ENSDARP00000022947	ENSDARP00000008022	G domain-containing protein.	Mitochondrial ribosomal protein L19.	0.502
LOC795887	mrpl23	ENSDARP00000022947	ENSDARP00000067178	G domain-containing protein.	39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.507
LOC795887	mrpl27	ENSDARP00000022947	ENSDARP00000043545	G domain-containing protein.	Mitochondrial ribosomal protein L27.	0.519
LOC795887	mrpl3	ENSDARP00000022947	ENSDARP00000141505	G domain-containing protein.	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.505
LOC795887	mrpl46	ENSDARP00000022947	ENSDARP00000007227	G domain-containing protein.	Mitochondrial ribosomal protein L46.	0.531
LOC795887	mxa	ENSDARP00000022947	ENSDARP00000094364	G domain-containing protein.	Interferon-induced GTP-binding protein MxA; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.589
LOC795887	tpm4b	ENSDARP00000022947	ENSDARP00000137812	G domain-containing protein.	Tropomyosin 4b.	0.718
LOC795887	ubxn7	ENSDARP00000022947	ENSDARP00000012036	G domain-containing protein.	UBX domain protein 7.	0.561
mov10b.1	ENSDARP00000135458	ENSDARP00000081380	ENSDARP00000135458	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	Si:dkey-40c23.2.	0.597
mov10b.1	LOC795887	ENSDARP00000081380	ENSDARP00000022947	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	G domain-containing protein.	0.845
mov10b.1	mxa	ENSDARP00000081380	ENSDARP00000094364	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	Interferon-induced GTP-binding protein MxA; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.476
mov10b.1	tpm4b	ENSDARP00000081380	ENSDARP00000137812	Putative helicase mov-10-B.1; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity).	Tropomyosin 4b.	0.560
mrpl19	LOC795887	ENSDARP00000008022	ENSDARP00000022947	Mitochondrial ribosomal protein L19.	G domain-containing protein.	0.502
mrpl19	mrpl23	ENSDARP00000008022	ENSDARP00000067178	Mitochondrial ribosomal protein L19.	39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.982
mrpl19	mrpl27	ENSDARP00000008022	ENSDARP00000043545	Mitochondrial ribosomal protein L19.	Mitochondrial ribosomal protein L27.	0.996

page 1 of 3

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About