reep3b protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

reep3b

Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family. (256 aa)

Predicted Functional Partners:

reep1

0.737

reep2

0.729

skap1

0.692

bmb

0.669

xxylt1

0.633

stab1

0.614

mxra7

0.589

LOC101884131

0.579

syngr3b

0.560

cyp26c1

0.555

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101884131	reep3b	ENSDARP00000130008	ENSDARP00000023124	Peptidase S1 domain-containing protein.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.579
LOC101884131	syngr3b	ENSDARP00000130008	ENSDARP00000107652	Peptidase S1 domain-containing protein.	Synaptogyrin.	0.719
bmb	reep3b	ENSDARP00000126692	ENSDARP00000023124	Protein brambleberry; Required for nuclear membrane fusion during karyogamy.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.669
cyp26c1	reep3b	ENSDARP00000072275	ENSDARP00000023124	Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.555
mxra7	reep3b	ENSDARP00000120648	ENSDARP00000023124	Matrix-remodelling-associated 7.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.589
reep1	reep2	ENSDARP00000023771	ENSDARP00000043161	Receptor expression-enhancing protein.	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	0.949
reep1	reep3b	ENSDARP00000023771	ENSDARP00000023124	Receptor expression-enhancing protein.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.737
reep1	skap1	ENSDARP00000023771	ENSDARP00000127292	Receptor expression-enhancing protein.	Src kinase-associated phosphoprotein 1.	0.420
reep2	reep1	ENSDARP00000043161	ENSDARP00000023771	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	Receptor expression-enhancing protein.	0.949
reep2	reep3b	ENSDARP00000043161	ENSDARP00000023124	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	0.729
reep2	skap1	ENSDARP00000043161	ENSDARP00000127292	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	Src kinase-associated phosphoprotein 1.	0.532
reep2	stab1	ENSDARP00000043161	ENSDARP00000086483	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	Stabilin 1.	0.454
reep3b	LOC101884131	ENSDARP00000023124	ENSDARP00000130008	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Peptidase S1 domain-containing protein.	0.579
reep3b	bmb	ENSDARP00000023124	ENSDARP00000126692	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Protein brambleberry; Required for nuclear membrane fusion during karyogamy.	0.669
reep3b	cyp26c1	ENSDARP00000023124	ENSDARP00000072275	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.555
reep3b	mxra7	ENSDARP00000023124	ENSDARP00000120648	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Matrix-remodelling-associated 7.	0.589
reep3b	reep1	ENSDARP00000023124	ENSDARP00000023771	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Receptor expression-enhancing protein.	0.737
reep3b	reep2	ENSDARP00000023124	ENSDARP00000043161	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors.	0.729
reep3b	skap1	ENSDARP00000023124	ENSDARP00000127292	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Src kinase-associated phosphoprotein 1.	0.692
reep3b	stab1	ENSDARP00000023124	ENSDARP00000086483	Receptor expression-enhancing protein 3; Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes (By similarity); Belongs to the DP1 family.	Stabilin 1.	0.614

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About