STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stmn1aStathmin; Belongs to the stathmin family. (148 aa)    
Predicted Functional Partners:
mapk3
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.924
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.905
stmn1b
Stathmin; Belongs to the stathmin family.
  
 
 
0.903
nisch
Nischarin.
      
 0.615
MANEAL
Glycoprotein endo-alpha-1,2-mannosidase-like protein.
    
 
 0.609
uhmk1
U2AF homology motif (UHM) kinase 1.
    
 
 0.609
ttl
Tubulin tyrosine ligase.
    
 
 0.591
birc5a
Baculoviral IAP repeat-containing 5a.
   
 
 0.568
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
 
 0.547
dpysl2b
Dihydropyrimidinase-like 2b.
   
 
 0.532
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.