Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fgl2aFibrinogen-like 2a. (451 aa)    
Predicted Functional Partners:
ENSDARP00000134072
Cystatin domain-containing protein.
   
  
 0.637
il4r.2
Interleukin 4 receptor, tandem duplicate 1.
    
 0.605
ndufab1b
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
      
 0.559
ponzr6
Plac8 onzin-related protein 6.
    
 
 0.555
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.508
ENSDARP00000156938
Si:ch211-212d10.1; Belongs to the peptidase S1 family.
   
 
 0.500
rab44
RAB44, member RAS oncogene family.
      
 0.463
pkib
cAMP-dependent protein kinase inhibitor; Belongs to the PKI family.
      
 0.447
papss1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
      
 0.446
E7EZT8_DANRE
Si:ch211-262i1.5.
    
   0.424
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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