STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts18ADAM metallopeptidase with thrombospondin type 1 motif, 18. (1244 aa)    
Predicted Functional Partners:
ccdc51
Coiled-coil domain-containing 51.
      
 0.807
znf541
Zinc finger protein 541.
      
 0.682
map3k9
Mitogen-activated protein kinase kinase kinase 9.
   
 
 0.603
fam174b
Membrane protein FAM174B; Essential for Golgi structural integrity. Belongs to the FAM174 family.
      
 0.566
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
0.562
igfn1.2
Immunoglobulin-like and fibronectin type III domain-containing 1, tandem duplicate 2.
   
  
 0.555
LOC101886422
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
  
  
0.549
adamtsl3
ADAMTS-like 3.
     
0.548
adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12.
  
0.547
adamtsl5
ADAMTS-like 5.
     
0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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