Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
brd9Bromodomain-containing protein 9; Plays a role in chromatin remodeling and regulation of transcription. Acts as a chromatin reader that recognizes and binds acylated histones: binds histones that are acetylated and/or butyrylated. (631 aa)    
Predicted Functional Partners:
bcl7a
B-cell CLL/lymphoma 7 protein family member A.
    
 0.989
arid2
AT-rich interactive domain 2 (ARID, RFX-like).
   
 0.987
phf10
PHD finger protein 10; Involved in transcription activity regulation by chromatin remodeling in the context of the neural progenitors-specific chromatin remodeling complex (npBAF complex). May play a role in the proliferation of neural progenitors (By similarity).
    
 0.985
smarce1
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily e, member 1.
   
 0.982
ss18
Synovial sarcoma translocation, chromosome 18 (H. sapiens).
   
 0.972
smarcc2
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 2.
   
 0.971
smarca4a
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 4a.
   
 0.969
smarcc1a
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 1a.
   
 0.963
smarcd1
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1.
   
 0.962
smarcc1b
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 1b.
   
 0.958
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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