Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glipr2lGLI pathogenesis-related 2,-like; Belongs to the CRISP family. (154 aa)    
Predicted Functional Partners:
gart
Phosphoribosylglycinamide formyltransferase.
    
  0.802
cyb5r4
Cytochrome b5 reductase 4; NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
     
 0.716
tfeb
Transcription factor EB.
      
 0.609
LOC100002406
Solute carrier family 46 member 2.
      
 0.545
LOC100536500
ShKT domain-containing protein; Belongs to the CRISP family.
  
   
 0.534
Plekhg1
DH domain-containing protein.
      
 0.509
nudt2
Nudix (nucleoside diphosphate-linked moiety X)-type motif 2.
  
  
 0.496
si:dkey-85n7.6
Si:dkey-85n7.6.
      
 0.496
tbata
Thymus, brain and testes-associated.
      
 0.496
eif4eb
Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family.
      
 0.491
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (10%) [HD]