Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7FAM4_DANRE | arrb1 | ENSDARP00000126068 | ENSDARP00000105997 | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | Arrestin, beta 1. | 0.927 |
E7FAM4_DANRE | arrb2b | ENSDARP00000126068 | ENSDARP00000024694 | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | Arrestin, beta 2b. | 0.927 |
E7FAM4_DANRE | gli2a | ENSDARP00000126068 | ENSDARP00000010693 | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | GLI family zinc finger 2a. | 0.407 |
E7FAM4_DANRE | gli3 | ENSDARP00000126068 | ENSDARP00000058991 | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | GLI family zinc finger 3. | 0.488 |
E7FAM4_DANRE | gpr161 | ENSDARP00000126068 | ENSDARP00000072514 | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | G-protein coupled receptor 161; Key negative regulator of Shh signaling during neural tube development. Recruited to primary cilia and acts as a regulator of the PKA-dependent basal repression machinery in Shh signaling by increasing cAMP levels, leading to promote the PKA-dependent processing of gli3 into gli3r and repress the Shh signaling. In presence of shh, it is removed from primary cilia, preventing its activity and allowing activation of the Shh signaling (By similarity). Required in left/right patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer vesicle; [...] | 0.901 |
arrb1 | E7FAM4_DANRE | ENSDARP00000105997 | ENSDARP00000126068 | Arrestin, beta 1. | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | 0.927 |
arrb1 | arrb2b | ENSDARP00000105997 | ENSDARP00000024694 | Arrestin, beta 1. | Arrestin, beta 2b. | 0.941 |
arrb1 | gli2a | ENSDARP00000105997 | ENSDARP00000010693 | Arrestin, beta 1. | GLI family zinc finger 2a. | 0.929 |
arrb1 | gli3 | ENSDARP00000105997 | ENSDARP00000058991 | Arrestin, beta 1. | GLI family zinc finger 3. | 0.919 |
arrb1 | gpr161 | ENSDARP00000105997 | ENSDARP00000072514 | Arrestin, beta 1. | G-protein coupled receptor 161; Key negative regulator of Shh signaling during neural tube development. Recruited to primary cilia and acts as a regulator of the PKA-dependent basal repression machinery in Shh signaling by increasing cAMP levels, leading to promote the PKA-dependent processing of gli3 into gli3r and repress the Shh signaling. In presence of shh, it is removed from primary cilia, preventing its activity and allowing activation of the Shh signaling (By similarity). Required in left/right patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer vesicle; [...] | 0.960 |
arrb1 | grk3 | ENSDARP00000105997 | ENSDARP00000157494 | Arrestin, beta 1. | G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | 0.937 |
arrb1 | kif3a | ENSDARP00000105997 | ENSDARP00000107221 | Arrestin, beta 1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.950 |
arrb1 | map2k4a | ENSDARP00000105997 | ENSDARP00000106153 | Arrestin, beta 1. | Mitogen-activated protein kinase kinase 4A; Belongs to the protein kinase superfamily. | 0.919 |
arrb1 | map2k4b | ENSDARP00000105997 | ENSDARP00000101456 | Arrestin, beta 1. | Mitogen-activated protein kinase kinase 4B; Belongs to the protein kinase superfamily. | 0.919 |
arrb1 | smo | ENSDARP00000105997 | ENSDARP00000013486 | Arrestin, beta 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.969 |
arrb2b | E7FAM4_DANRE | ENSDARP00000024694 | ENSDARP00000126068 | Arrestin, beta 2b. | Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. | 0.927 |
arrb2b | arrb1 | ENSDARP00000024694 | ENSDARP00000105997 | Arrestin, beta 2b. | Arrestin, beta 1. | 0.941 |
arrb2b | gli2a | ENSDARP00000024694 | ENSDARP00000010693 | Arrestin, beta 2b. | GLI family zinc finger 2a. | 0.927 |
arrb2b | gli3 | ENSDARP00000024694 | ENSDARP00000058991 | Arrestin, beta 2b. | GLI family zinc finger 3. | 0.917 |
arrb2b | gpr161 | ENSDARP00000024694 | ENSDARP00000072514 | Arrestin, beta 2b. | G-protein coupled receptor 161; Key negative regulator of Shh signaling during neural tube development. Recruited to primary cilia and acts as a regulator of the PKA-dependent basal repression machinery in Shh signaling by increasing cAMP levels, leading to promote the PKA-dependent processing of gli3 into gli3r and repress the Shh signaling. In presence of shh, it is removed from primary cilia, preventing its activity and allowing activation of the Shh signaling (By similarity). Required in left/right patterning by modulating Ca(2+) levels in the cells surrounding the Kupffer vesicle; [...] | 0.958 |
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