STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCAZgc:92027. (205 aa)    
Predicted Functional Partners:
ggact.1
Gamma-glutamylaminecyclotransferase A; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family.
   
  
 0.950
cga
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.834
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
      
 0.690
cast
Calpastatin.
   
 
 0.541
gdf5
Growth differentiation factor 5.
   
  
 0.536
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.534
meis1a
Myeloid ecotropic viral integration site 4.1a.
   
  
 0.485
agt
Angiotensinogen; Belongs to the serpin family.
      
 0.480
capn2b
Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.
   
 
0.463
anxa11a
Annexin.
   
 
 0.451
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.