STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc12a3Solute carrier family 12 member 3. (1012 aa)    
Predicted Functional Partners:
slc20a1a
Sodium-dependent phosphate transporter 1-A; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport; Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
      
 0.942
slc4a4a
Anion exchange protein.
      
 0.847
cdh17
Cadherin 17, LI cadherin (liver-intestine).
   
  
 0.773
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
      
 0.742
smyhc1
Slow myosin heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.731
clcnk
Chloride channel protein.
   
  
 0.726
wt1b
WT1 transcription factor b.
   
 
 0.721
cnnm2a
Cyclin and CBS domain divalent metal cation transport mediator 2a.
      
 0.719
slc9a3.2
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
   
 
 0.718
nphs1
NPHS1 adhesion molecule, nephrin.
      
 0.705
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.