Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| foxa2 | nkx2.1 | ENSDARP00000007827 | ENSDARP00000025546 | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | NK2 homeobox 1b. | 0.735 |
| foxa2 | olig2 | ENSDARP00000007827 | ENSDARP00000060005 | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | Oligodendrocyte lineage transcription factor 2. | 0.624 |
| foxa2 | shha | ENSDARP00000007827 | ENSDARP00000125090 | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.845 |
| foxa2 | six3b | ENSDARP00000007827 | ENSDARP00000071625 | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | Sine oculis homeobox homolog 3b. | 0.476 |
| foxg1a | lhx6 | ENSDARP00000094979 | ENSDARP00000017657 | Forkhead box G1a. | LIM homeobox 6. | 0.749 |
| foxg1a | nkx2.1 | ENSDARP00000094979 | ENSDARP00000025546 | Forkhead box G1a. | NK2 homeobox 1b. | 0.731 |
| foxg1a | olig2 | ENSDARP00000094979 | ENSDARP00000060005 | Forkhead box G1a. | Oligodendrocyte lineage transcription factor 2. | 0.493 |
| foxg1a | shha | ENSDARP00000094979 | ENSDARP00000125090 | Forkhead box G1a. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.816 |
| foxg1a | six3b | ENSDARP00000094979 | ENSDARP00000071625 | Forkhead box G1a. | Sine oculis homeobox homolog 3b. | 0.773 |
| foxg1a | tbr1b | ENSDARP00000094979 | ENSDARP00000019930 | Forkhead box G1a. | T-box brain transcription factor 1b. | 0.730 |
| lhx6 | foxg1a | ENSDARP00000017657 | ENSDARP00000094979 | LIM homeobox 6. | Forkhead box G1a. | 0.749 |
| lhx6 | nkx2.1 | ENSDARP00000017657 | ENSDARP00000025546 | LIM homeobox 6. | NK2 homeobox 1b. | 0.838 |
| lhx6 | shha | ENSDARP00000017657 | ENSDARP00000125090 | LIM homeobox 6. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.603 |
| lhx6 | tbr1b | ENSDARP00000017657 | ENSDARP00000019930 | LIM homeobox 6. | T-box brain transcription factor 1b. | 0.608 |
| nkx2.1 | foxa2 | ENSDARP00000025546 | ENSDARP00000007827 | NK2 homeobox 1b. | Forkhead box protein A2; May play a crucial role in specification of both the axial mesendoderm and the ventral nervous system. | 0.735 |
| nkx2.1 | foxg1a | ENSDARP00000025546 | ENSDARP00000094979 | NK2 homeobox 1b. | Forkhead box G1a. | 0.731 |
| nkx2.1 | lhx6 | ENSDARP00000025546 | ENSDARP00000017657 | NK2 homeobox 1b. | LIM homeobox 6. | 0.838 |
| nkx2.1 | olig2 | ENSDARP00000025546 | ENSDARP00000060005 | NK2 homeobox 1b. | Oligodendrocyte lineage transcription factor 2. | 0.657 |
| nkx2.1 | pax8 | ENSDARP00000025546 | ENSDARP00000033414 | NK2 homeobox 1b. | Paired box 8. | 0.768 |
| nkx2.1 | shha | ENSDARP00000025546 | ENSDARP00000125090 | NK2 homeobox 1b. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.817 |
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