Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kctd5aPotassium channel tetramerization domain-containing 5a. (224 aa)    
Predicted Functional Partners:
cul3a
Cullin 3a; Belongs to the cullin family.
    
 
 0.826
cul3b
Cullin 3b; Belongs to the cullin family.
    
 
 0.826
kctd1
Potassium channel tetramerization domain-containing 1.
    
 
 0.792
kctd20
BTB domain-containing protein.
    
 
 0.655
kctd2
Potassium channel tetramerization domain-containing 2.
    
 
 0.638
dmc1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
    
   0.635
kctd9b
Potassium channel tetramerization domain-containing 9b.
    
 
0.598
zbtb44
Zinc finger and BTB domain-containing 44.
    
 
 0.568
ankfy1
Ankyrin repeat and FYVE domain-containing 1.
      
 0.565
camk1b
Calcium/calmodulin-dependent protein kinase Ib; Belongs to the protein kinase superfamily.
      
 0.564
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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