STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl53Mitochondrial ribosomal protein L53. (108 aa)    
Predicted Functional Partners:
mrps33
Mitochondrial ribosomal protein S33.
   
 
 0.978
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.969
mrpl51
39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.
   
 
 0.923
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.909
mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.906
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.900
mrpl4
39S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL4 family.
   
 
 0.900
mrpl10
39S ribosomal protein L10, mitochondrial; Belongs to the universal ribosomal protein uL10 family.
   
 
 0.890
mrpl32
Mitochondrial ribosomal protein L32.
   
   0.888
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.886
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.