Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F1QAI9_DANRE | cd9b | ENSDARP00000103129 | ENSDARP00000026201 | Si:ch211-132g1.7. | Tetraspanin. | 0.693 |
cd9b | F1QAI9_DANRE | ENSDARP00000026201 | ENSDARP00000103129 | Tetraspanin. | Si:ch211-132g1.7. | 0.693 |
cd9b | cldnb | ENSDARP00000026201 | ENSDARP00000013958 | Tetraspanin. | Cldnb protein. | 0.692 |
cd9b | clvs2 | ENSDARP00000026201 | ENSDARP00000069597 | Tetraspanin. | Clavesin-2; Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). | 0.734 |
cd9b | epb41l3a | ENSDARP00000026201 | ENSDARP00000111490 | Tetraspanin. | Erythrocyte membrane protein band 4.1-like 3a. | 0.729 |
cd9b | igsf8 | ENSDARP00000026201 | ENSDARP00000056137 | Tetraspanin. | Immunoglobulin superfamily, member 8. | 0.759 |
cd9b | mnd1 | ENSDARP00000026201 | ENSDARP00000054264 | Tetraspanin. | Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double- strand breaks (By similarity); Belongs to the MND1 family. | 0.742 |
cd9b | ptgfrn | ENSDARP00000026201 | ENSDARP00000098616 | Tetraspanin. | Uncharacterized protein. | 0.693 |
cd9b | sdk2a | ENSDARP00000026201 | ENSDARP00000139228 | Tetraspanin. | Sidekick cell adhesion molecule 2a. | 0.816 |
cd9b | shroom2a | ENSDARP00000026201 | ENSDARP00000100323 | Tetraspanin. | Shroom family member 2a. | 0.743 |
cd9b | zgc:66447 | ENSDARP00000026201 | ENSDARP00000032457 | Tetraspanin. | SLAIN motif-containing protein-like; Belongs to the SLAIN motif-containing family. | 0.831 |
cldnb | cd9b | ENSDARP00000013958 | ENSDARP00000026201 | Cldnb protein. | Tetraspanin. | 0.692 |
cldnb | shroom2a | ENSDARP00000013958 | ENSDARP00000100323 | Cldnb protein. | Shroom family member 2a. | 0.453 |
clvs2 | cd9b | ENSDARP00000069597 | ENSDARP00000026201 | Clavesin-2; Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). | Tetraspanin. | 0.734 |
clvs2 | mnd1 | ENSDARP00000069597 | ENSDARP00000054264 | Clavesin-2; Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). | Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double- strand breaks (By similarity); Belongs to the MND1 family. | 0.841 |
clvs2 | sdk2a | ENSDARP00000069597 | ENSDARP00000139228 | Clavesin-2; Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). | Sidekick cell adhesion molecule 2a. | 0.860 |
clvs2 | zgc:66447 | ENSDARP00000069597 | ENSDARP00000032457 | Clavesin-2; Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). | SLAIN motif-containing protein-like; Belongs to the SLAIN motif-containing family. | 0.880 |
epb41l3a | cd9b | ENSDARP00000111490 | ENSDARP00000026201 | Erythrocyte membrane protein band 4.1-like 3a. | Tetraspanin. | 0.729 |
igsf8 | cd9b | ENSDARP00000056137 | ENSDARP00000026201 | Immunoglobulin superfamily, member 8. | Tetraspanin. | 0.759 |
mnd1 | cd9b | ENSDARP00000054264 | ENSDARP00000026201 | Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double- strand breaks (By similarity); Belongs to the MND1 family. | Tetraspanin. | 0.742 |
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