dbnla protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

dbnla

Drebrin-like a. (496 aa)

Predicted Functional Partners:

capzb

0.727

zgc:64106

0.714

cap1

0.668

cap2

0.668

scel

0.657

zgc:92380

0.607

akt2l

0.605

pls3

0.604

pls1

0.604

lcp1

0.604

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
akt2l	dbnla	ENSDARP00000140634	ENSDARP00000026512	V-akt murine thymoma viral oncogene homolog 2,-like.	Drebrin-like a.	0.605
cap1	capzb	ENSDARP00000020578	ENSDARP00000140899	Adenylyl cyclase-associated protein; Belongs to the CAP family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.739
cap1	dbnla	ENSDARP00000020578	ENSDARP00000026512	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Drebrin-like a.	0.668
cap1	lcp1	ENSDARP00000020578	ENSDARP00000142380	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin-2; Actin-binding protein. Plays a role in the activation of T- cells (By similarity).	0.639
cap1	pls1	ENSDARP00000020578	ENSDARP00000109993	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin 1 (I isoform).	0.639
cap1	pls3	ENSDARP00000020578	ENSDARP00000054848	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin 3 (T isoform).	0.706
cap2	capzb	ENSDARP00000139926	ENSDARP00000140899	Adenylyl cyclase-associated protein; Belongs to the CAP family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.835
cap2	dbnla	ENSDARP00000139926	ENSDARP00000026512	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Drebrin-like a.	0.668
cap2	lcp1	ENSDARP00000139926	ENSDARP00000142380	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin-2; Actin-binding protein. Plays a role in the activation of T- cells (By similarity).	0.639
cap2	pls1	ENSDARP00000139926	ENSDARP00000109993	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin 1 (I isoform).	0.639
cap2	pls3	ENSDARP00000139926	ENSDARP00000054848	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Plastin 3 (T isoform).	0.639
capzb	cap1	ENSDARP00000140899	ENSDARP00000020578	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.739
capzb	cap2	ENSDARP00000140899	ENSDARP00000139926	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.835
capzb	dbnla	ENSDARP00000140899	ENSDARP00000026512	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Drebrin-like a.	0.727
capzb	lcp1	ENSDARP00000140899	ENSDARP00000142380	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Plastin-2; Actin-binding protein. Plays a role in the activation of T- cells (By similarity).	0.784
capzb	pls1	ENSDARP00000140899	ENSDARP00000109993	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Plastin 1 (I isoform).	0.784
capzb	pls3	ENSDARP00000140899	ENSDARP00000054848	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Plastin 3 (T isoform).	0.784
dbnla	akt2l	ENSDARP00000026512	ENSDARP00000140634	Drebrin-like a.	V-akt murine thymoma viral oncogene homolog 2,-like.	0.605
dbnla	cap1	ENSDARP00000026512	ENSDARP00000020578	Drebrin-like a.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.668
dbnla	cap2	ENSDARP00000026512	ENSDARP00000139926	Drebrin-like a.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.668

page 1 of 3

Server load: low (12%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About