rassf7b protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rassf7b

Ras association domain family member 7b. (427 aa)

Predicted Functional Partners:

dhrs13a.1

0.799

sypl2b

0.780

cdc14aa

0.689

quo

0.681

vgll4l

0.670

ttc25

0.607

slc35d1a

0.597

mbd3a

0.595

abcc6a

0.594

daw1

0.594

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
abcc6a	cdc14aa	ENSDARP00000065432	ENSDARP00000010568	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Cell division cycle 14Aa.	0.470
abcc6a	dhrs13a.1	ENSDARP00000065432	ENSDARP00000090093	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.685
abcc6a	quo	ENSDARP00000065432	ENSDARP00000127685	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Quattro.	0.466
abcc6a	rassf7b	ENSDARP00000065432	ENSDARP00000027148	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Ras association domain family member 7b.	0.594
abcc6a	slc35d1a	ENSDARP00000065432	ENSDARP00000068446	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Solute carrier family 35 member D1a.	0.416
abcc6a	sypl2b	ENSDARP00000065432	ENSDARP00000001793	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Novel protein containing a membrane-associating domain (Wu:fc22a07).	0.596
abcc6a	ttc25	ENSDARP00000065432	ENSDARP00000075390	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Tetratricopeptide repeat protein 25; Required for the docking of the outer dynein arm to cilia, hence plays an essential role in cilia motility.	0.432
abcc6a	vgll4l	ENSDARP00000065432	ENSDARP00000089695	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	Vestigial-like 4 like.	0.453
cdc14aa	abcc6a	ENSDARP00000010568	ENSDARP00000065432	Cell division cycle 14Aa.	ATP-binding cassette, sub-family C (CFTR/MRP), member 6a.	0.470
cdc14aa	daw1	ENSDARP00000010568	ENSDARP00000116595	Cell division cycle 14Aa.	Dynein assembly factor with WDR repeat domains 1; Required for axonemal dynein assembly and ciliary motility in ciliated organs, including Kupffer's vesicle, during embryogenesis.	0.468
cdc14aa	dhrs13a.1	ENSDARP00000010568	ENSDARP00000090093	Cell division cycle 14Aa.	Dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.727
cdc14aa	mbd3a	ENSDARP00000010568	ENSDARP00000082941	Cell division cycle 14Aa.	Methyl-CpG-binding domain protein 3a.	0.488
cdc14aa	quo	ENSDARP00000010568	ENSDARP00000127685	Cell division cycle 14Aa.	Quattro.	0.568
cdc14aa	rassf7b	ENSDARP00000010568	ENSDARP00000027148	Cell division cycle 14Aa.	Ras association domain family member 7b.	0.689
cdc14aa	slc35d1a	ENSDARP00000010568	ENSDARP00000068446	Cell division cycle 14Aa.	Solute carrier family 35 member D1a.	0.503
cdc14aa	sypl2b	ENSDARP00000010568	ENSDARP00000001793	Cell division cycle 14Aa.	Novel protein containing a membrane-associating domain (Wu:fc22a07).	0.681
cdc14aa	ttc25	ENSDARP00000010568	ENSDARP00000075390	Cell division cycle 14Aa.	Tetratricopeptide repeat protein 25; Required for the docking of the outer dynein arm to cilia, hence plays an essential role in cilia motility.	0.547
cdc14aa	vgll4l	ENSDARP00000010568	ENSDARP00000089695	Cell division cycle 14Aa.	Vestigial-like 4 like.	0.556
daw1	cdc14aa	ENSDARP00000116595	ENSDARP00000010568	Dynein assembly factor with WDR repeat domains 1; Required for axonemal dynein assembly and ciliary motility in ciliated organs, including Kupffer's vesicle, during embryogenesis.	Cell division cycle 14Aa.	0.468
daw1	dhrs13a.1	ENSDARP00000116595	ENSDARP00000090093	Dynein assembly factor with WDR repeat domains 1; Required for axonemal dynein assembly and ciliary motility in ciliated organs, including Kupffer's vesicle, during embryogenesis.	Dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.626

page 1 of 6

Server load: low (18%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About