STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc9a8Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (640 aa)    
Predicted Functional Partners:
ttc37
Tetratricopeptide repeat domain 37.
      
 0.765
dusp28
Dual-specificity phosphatase 28.
      
 0.743
B8JLK9_DANRE
Si:dkey-69o16.5.
      
 0.736
slc26a11
Solute carrier family 26 member 11.
  
  
 0.697
slc7a6os
Probable RNA polymerase II nuclear localization protein SLC7A6OS; Directs RNA polymerase II nuclear import.
      
 0.695
zc3h15
Zinc finger CCCH domain-containing protein 15; Protects drg1 from proteolytic degradation.
   
  
 0.682
proca-2
Protein C (inactivator of coagulation factors Va and VIIIa), a.
      
 0.670
slc35f2
Solute carrier family 35 member F2.
     
 0.669
arf3a
ADP-ribosylation factor 3a; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.669
proca
Protein C (inactivator of coagulation factors Va and VIIIa), a.
      
 0.649
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.