STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC1Si:dkey-222l13.1. (1093 aa)    
Predicted Functional Partners:
rims2a
Regulating synaptic membrane exocytosis 2a.
    
 
 0.876
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.876
rims3
Regulating synaptic membrane exocytosis 3.
    
 
 0.727
yeats4
YEATS domain-containing 4.
    
 
 0.677
dbn1
Drebrin 1.
    
 
 0.672
zfpl1
Zinc finger protein-like 1; Required for cis-Golgi integrity and efficient ER to Golgi transport; Belongs to the ZFPL1 family.
      
 0.618
rad9a
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.596
chpt1
Cholinephosphotransferase 1; Catalyzes phosphatidylcholine biosynthesis from CDP-choline. It thereby plays a central role in the formation and maintenance of vesicular membranes (By similarity).
      
 0.577
zmiz2
Zinc finger, MIZ-type-containing 2.
      
 0.552
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.547
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.