STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps22Mitochondrial ribosomal protein S22. (340 aa)    
Predicted Functional Partners:
ptcd3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that may have a role in mitochondrial translation; Belongs to the mitochondrion-specific ribosomal protein mS39 family.
   
 
 0.990
dap3
Death-associated protein 3.
   
 0.989
mrps18b
Mitochondrial ribosomal protein S18B.
   
 
 0.987
mrps16
Mitochondrial ribosomal protein S16.
   
 0.985
mrps35
28S ribosomal protein S35, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS35 family.
   
 0.980
mrps31
Mitochondrial ribosomal protein S31.
   
 0.980
mrps9
Mitochondrial ribosomal protein S9.
   
 0.980
mrps26
Novel protein similar to vertebrate mitochondrial ribosomal protein S26 (MRPS26).
   
 0.979
mrps10
Probable 28S ribosomal protein S10, mitochondrial; Belongs to the universal ribosomal protein uS10 family.
   
 0.977
mrps34
Mitochondrial ribosomal protein S34.
   
 0.973
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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