Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
si:dkey-43k4.5Si:dkey-43k4.5; Belongs to the potassium channel family. (487 aa)    
Predicted Functional Partners:
kcng1
Potassium voltage-gated channel, subfamily G, member 1; Belongs to the potassium channel family.
    
 
 0.766
si:dkey-85n7.6
Si:dkey-85n7.6.
      
 0.742
kcnj13
Potassium inwardly rectifying channel subfamily J member 13.
     
 0.729
faub
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.714
faua
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.714
nags
N-acetylglutamate synthase, conserved domain form; Plays a role in the regulation of ureagenesis by producing the essential cofactor N-acetylglutamate (NAG), thus modulating carbamoylphosphate synthase I (cps1) activity. Belongs to the acetyltransferase family.
      
 0.686
crim1
Cysteine-rich motor neuron 1 protein; May play a role in CNS development by interacting with growth factors implicated in motor neuron differentiation and survival.
   
 
 0.651
fkbp9
Peptidylprolyl isomerase.
    
 
 0.625
laptm4a
Lysosomal-associated protein transmembrane 4 alpha.
      
 0.619
laptm4b
Lysosomal associated protein transmembrane 4 beta.
      
 0.619
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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