Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dpp6bDipeptidyl-peptidase 6b; Belongs to the peptidase S9B family. (857 aa)    
Predicted Functional Partners:
zgc:136971
Zgc:136971.
      
 0.782
dpydb
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine (By similarity); Belongs to the dihydropyrimidine dehydrogenase family.
   
  
 0.685
kcnd2
Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.
   
 
 0.662
cbln4
Cerebellin 4 precursor.
   
  
 0.604
il1rapl1a
Interleukin-1 receptor accessory protein-like 1-A; May regulate secretion and presynaptic differentiation through inhibition of the activity of N-type voltage-gated calcium channel. During presynaptic differentiation may regulate both synaptic vesicle accumulation in axon terminals and subsequent axon terminal remodeling; Belongs to the interleukin-1 receptor family.
   
  
 0.603
ptchd1
Patched domain-containing protein 1.
   
  
 0.602
ptchd4
Patched domain-containing protein 1.
   
  
 0.601
ccl39.7
Chemokine (C-C motif) ligand 39, duplicate 7.
    
 
 0.599
ptpdc1a
Protein tyrosine phosphatase domain-containing protein 1; May play roles in cilia formation and/or maintenance.
      
 0.596
LOC553228
Folate gamma-glutamyl hydrolase.
      
 0.590
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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