STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col24a1LAM_G_DOMAIN domain-containing protein. (740 aa)    
Predicted Functional Partners:
p3h1
Prolyl 3-hydroxylase 1.
   
 0.739
crtap
Cartilage-associated protein.
    
 0.727
col24a1-2
Collagen type XXIV alpha 1.
 
      0.723
col11a2
Collagen, type XI, alpha 2.
  
 
0.597
col2a1a
Collagen, type II, alpha 1a.
  
 
0.588
col5a3a
Collagen, type V, alpha 3a.
  
 
0.583
col6a2
Collagen, type VI, alpha 2.
  
0.581
fbln7
Fibulin 7.
    
 
 0.580
col5a1
Procollagen, type V, alpha 1.
  
 
0.571
col6a1
Collagen, type VI, alpha 1.
  
0.558
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.