STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stxbp2Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (595 aa)    
Predicted Functional Partners:
stx1a
Syntaxin 1A (brain); Belongs to the syntaxin family.
   
 0.777
myo5b
Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.682
sytl3
Synaptotagmin-like 3.
    
 
 0.649
exoc5
Exocyst complex component 5.
    
 
 0.630
sytl2b
Synaptotagmin-like 2b.
    
 
 0.623
vamp8
Vesicle-associated membrane protein 8 (Endobrevin).
   
 
 0.618
sytl5
Synaptotagmin-like 5.
    
 
 0.610
sytl4
Synaptotagmin-like 4.
    
 
 0.610
vamp4
Vesicle-associated membrane protein 4.
    
 
 0.603
sytl1
Synaptotagmin-like 1.
    
 
 0.598
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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