Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stxbp2Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (595 aa)    
Predicted Functional Partners:
STX3
Zgc:165520; Belongs to the syntaxin family.
    
 0.914
stx2b
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.842
stx11b.1
Syntaxin 11b, tandem duplicate 1.
    
 0.827
stx11b.2
Syntaxin 11b, tandem duplicate 2.
    
 0.827
stx11a
Syntaxin 11a; Belongs to the syntaxin family.
   
 0.827
stx1a
Syntaxin 1A (brain); Belongs to the syntaxin family.
    
 0.800
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.754
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 
 0.751
stx2a
Syntaxin 2a; Belongs to the syntaxin family.
    
 0.750
stx3a
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.750
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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