Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atl1 | chmp1b | ENSDARP00000101056 | ENSDARP00000134015 | Atlastin GTPase 1. | Charged multivesicular body protein 1b; Probable peripherally associated component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. | 0.699 |
| atl1 | ist1 | ENSDARP00000101056 | ENSDARP00000068086 | Atlastin GTPase 1. | IST1 factor-associated with ESCRT-III. | 0.625 |
| atl1 | reep1 | ENSDARP00000101056 | ENSDARP00000023771 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.976 |
| atl1 | sparta | ENSDARP00000101056 | ENSDARP00000090378 | Atlastin GTPase 1. | Zgc:172059 protein. | 0.924 |
| atl1 | spast | ENSDARP00000101056 | ENSDARP00000029675 | Atlastin GTPase 1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.981 |
| atl1 | spg11 | ENSDARP00000101056 | ENSDARP00000067557 | Atlastin GTPase 1. | SPG11 vesicle-trafficking-associated, spatacsin. | 0.852 |
| atl1 | zfyve27 | ENSDARP00000101056 | ENSDARP00000113701 | Atlastin GTPase 1. | Zinc finger, FYVE domain-containing 27. | 0.839 |
| atl2 | reep1 | ENSDARP00000074909 | ENSDARP00000023771 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.894 |
| atl2 | sparta | ENSDARP00000074909 | ENSDARP00000090378 | Atlastin GTPase 2. | Zgc:172059 protein. | 0.896 |
| atl2 | spast | ENSDARP00000074909 | ENSDARP00000029675 | Atlastin GTPase 2. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.922 |
| atl2 | spg11 | ENSDARP00000074909 | ENSDARP00000067557 | Atlastin GTPase 2. | SPG11 vesicle-trafficking-associated, spatacsin. | 0.541 |
| atl2 | zfyve27 | ENSDARP00000074909 | ENSDARP00000113701 | Atlastin GTPase 2. | Zinc finger, FYVE domain-containing 27. | 0.620 |
| atl3 | reep1 | ENSDARP00000012931 | ENSDARP00000023771 | Atlastin 3. | Receptor expression-enhancing protein. | 0.889 |
| atl3 | sparta | ENSDARP00000012931 | ENSDARP00000090378 | Atlastin 3. | Zgc:172059 protein. | 0.874 |
| atl3 | spast | ENSDARP00000012931 | ENSDARP00000029675 | Atlastin 3. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.897 |
| atl3 | spg11 | ENSDARP00000012931 | ENSDARP00000067557 | Atlastin 3. | SPG11 vesicle-trafficking-associated, spatacsin. | 0.595 |
| atl3 | zfyve27 | ENSDARP00000012931 | ENSDARP00000113701 | Atlastin 3. | Zinc finger, FYVE domain-containing 27. | 0.619 |
| chmp1b | atl1 | ENSDARP00000134015 | ENSDARP00000101056 | Charged multivesicular body protein 1b; Probable peripherally associated component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. | Atlastin GTPase 1. | 0.699 |
| chmp1b | ist1 | ENSDARP00000134015 | ENSDARP00000068086 | Charged multivesicular body protein 1b; Probable peripherally associated component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. | IST1 factor-associated with ESCRT-III. | 0.998 |
| chmp1b | reep1 | ENSDARP00000134015 | ENSDARP00000023771 | Charged multivesicular body protein 1b; Probable peripherally associated component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. | Receptor expression-enhancing protein. | 0.453 |
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