Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gdap2Ganglioside-induced differentiation-associated protein 2; Belongs to the GDAP2 family. (504 aa)    
Predicted Functional Partners:
wdr3
WD repeat domain 3.
      
 0.903
ptpn9b
Protein tyrosine phosphatase non-receptor type 9b.
      
 0.835
ptpn9a
Protein tyrosine phosphatase non-receptor type 9a.
      
 0.834
igsf3
Immunoglobulin superfamily, member 3.
      
 0.820
ptgfrn
Uncharacterized protein.
      
 0.790
R4GDY9_DANRE
Si:ch211-132g1.1.
   
  
 0.790
ENSDARP00000130770
Si:dkey-11f4.14.
      
 0.788
mcf2la
Mcf.2 cell line-derived-transforming sequence-like a.
      
 0.717
nhlh2
Nescient helix loop helix 2.
      
 0.708
tshz3b
Teashirt zinc finger homeobox 3b.
      
 0.679
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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