STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdap2Ganglioside-induced differentiation-associated protein 2; Belongs to the GDAP2 family. (504 aa)    
Predicted Functional Partners:
igsf3
Immunoglobulin superfamily, member 3.
      
 0.907
wdr3
WD repeat domain 3.
   
  
 0.905
ptgfrn
Uncharacterized protein.
      
 0.868
R4GDY9_DANRE
Si:ch211-132g1.1.
      
 0.839
ENSDARP00000130770
Si:dkey-11f4.14.
      
 0.839
tbx15
T-box transcription factor 15.
      
 0.736
nhlh2
Nescient helix loop helix 2.
      
 0.733
tshz3b
Teashirt zinc finger homeobox 3b.
      
 0.725
cd2bp2
CD2 (cytoplasmic tail)-binding protein 2.
      
 0.618
macroh2a2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
  
 
 
 0.615
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.