Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tpgs2Tubulin polyglutamylase complex subunit 2. (290 aa)    
Predicted Functional Partners:
nicn1
Zgc:100984.
    
 
 0.978
ttll1
Tubulin tyrosine ligase-like family, member 1.
   
 
 0.969
TPGS1
Zgc:92789.
    
 
 0.886
C25H11orf49
UPF0705 protein C11orf49 homolog; Belongs to the UPF0705 family.
    
   0.856
trmt13
tRNA methyltransferase 13 homolog.
      
 0.653
ttl
Tubulin tyrosine ligase.
   
   0.643
zgc:162344
Zgc:162344.
      
 0.643
tbcb
Tubulin folding cofactor B.
      
 0.623
C2H5orf22
UPF0489 protein C5orf22 homolog; Belongs to the UPF0489 family.
      
 0.622
Q5RGA5_DANRE
Si:ch211-59d15.9.
      
 0.610
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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