Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clic5aChloride intracellular channel protein; Belongs to the chloride channel CLIC family. (246 aa)    
Predicted Functional Partners:
slco1f3
Solute carrier organic anion transporter family member.
      
 0.787
kcnh5b
Potassium voltage-gated channel, subfamily H (eag-related), member 5b.
      
 0.782
ppp1r18
Protein phosphatase 1, regulatory subunit 18.
   
 
 0.756
slco1e1
Solute carrier organic anion transporter family member.
      
 0.720
slco1f4
Solute carrier organic anion transporter family member.
      
 0.720
slc25a47a
Solute carrier family 25 member 47-A.
      
 0.719
slco1f1
Solute carrier organic anion transporter family member.
      
 0.719
slco1f2
Solute carrier organic anion transporter family member.
      
 0.719
kcnk10a
Potassium channel, subfamily K, member 10a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.682
LOC556735
Solute carrier organic anion transporter family member.
      
 0.663
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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