STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grm6bGlutamate receptor, metabotropic 6b. (909 aa)    
Predicted Functional Partners:
cacna2d4b
Calcium channel, voltage-dependent, alpha 2/delta subunit 4b.
   
  
 0.805
thrab
Thyroid hormone receptor alpha b.
   
 
 0.611
lrit3b
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
   
  
 0.557
he1.2
Metalloendopeptidase.
      
 0.542
oxtr
Isotocin receptor-like 2; Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
   
  
 0.527
grin2ab
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.
   
 
 0.515
dgkh
Diacylglycerol kinase.
   
  
 0.512
elfn1b
Extracellular leucine-rich repeat and fibronectin type III domain-containing 1b.
   
 
 0.511
grk1b
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 
 0.505
guca1d
Guanylate cyclase activating protein 4.
   
 
 0.499
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.