STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd52aSerine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C; Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates. (1071 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
    
 
 0.893
sirt7
Sirtuin 7.
    
 
 0.838
paip2b
Poly(A)-binding protein-interacting protein 2B.
      
 0.816
eif3ja
Eukaryotic translation initiation factor 3 subunit J-A; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.813
mbnl3
Muscleblind-like-splicing regulator 3.
   
  
 0.670
znf609b
Zinc finger protein 609b.
   
  
 0.667
itcha
E3 ubiquitin-protein ligase.
    
 
 0.657
mbnl1
Muscleblind-like-splicing regulator 1.
      
 0.646
stk17b
Serine/threonine kinase 17B (Apoptosis-inducing); Belongs to the protein kinase superfamily.
    
 
 0.642
rprd1a
Regulation of nuclear pre-mRNA domain-containing 1A.
    
 
 0.615
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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